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Genomics Series1 — RNA-Seq Part 2

March 4 @ 1:30 pm - 4:30 pm

Part II    Wednesday, March 4, 2020

4. Data processing and filtering

  1. Introduction to R and Bioconductor
  2. Data processing–filtering
  3. Normalization

5. Quantification and Differential expression

  1. Expression Quantification
  2. Statistical Models
  3. Multiple test correction

6. Analysis QC (Sample QC)

  1. Clustering
  2. PCA
  3. Heatmap
  4. Volcano plot

Lab exercise: data preparation; DE analysis with edgeR; PCA, Clustering, heatmap, Volcano plot…

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Genomics Series1 — RNA-Seq Part 2

Details

Date:
March 4
Time:
1:30 pm - 4:30 pm

Organizer

OARC
Phone:
9739721004
Email:
yc759@oarc.rutgers.edu; vlad.khol@rutgers.edu
Website:
https://oarc.rutgers.edu/

Venue

Allison Road Classrooms (ARC) IML 118
Allison Road Classroom Building
Piscataway, NJ 08854 United States
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